Statistics and references
Integrated data
The following datasets and databases have been incorporated:
| Database / Resource | Version | Retrieval date | #Categories | #Supported species | Reference |
|---|---|---|---|---|---|
| miRBase | 22.1 | November 2020 | 5398 | 3 | doi:10.1093/nar/gky1141 |
| miRTarBase | 8.0 | November 2020 | 553114 | 3 | doi:10.1093/nar/gkz896 |
| mirDIP | 4.1 | November 2020 | 1518675 | 1 | doi:10.1093/nar/gkx1144 |
| miRDB | 6.0 | November 2020 | 1173378 | 2 | doi:10.1093/nar/gkz757 |
| miRPathDB | 2.0 | December 2020 | 13315 | 2 | doi:10.1093/nar/gkz1022 |
| miRATBase | 1.0 | December 2020 | 15 | 1 | doi:10.1093/nar/gkaa1161 |
| miEAA | 2.0 | December 2020 | 4314 | 3 | doi:10.1093/nar/gkaa309 |
| GeneTrail | 3 | December 2020 | 18632 | 1 | doi:10.1093/nar/gkaa306 |
miRNA annotations
| Species | Source database | Version | #miRNAs |
|---|---|---|---|
| Human | miRBase | 22.1 | 2656 |
| Mouse | miRBase | 22.1 | 1978 |
| Rat | miRBase | 22.1 | 764 |
Validated targets
| Species | Source database | Version | #strong evidence | #weak evidence | #total targets |
|---|---|---|---|---|---|
| Human | miRTarBase | 8.0 | 11170 | 491482 | 502652 |
| Mouse | miRTarBase | 8.0 | 1701 | 48129 | 49830 |
| Rat | miRTarBase | 8.0 | 436 | 196 | 632 |
| Human | miRATBase | 1 | 251 | 0 | 251 |
Predicted targets
| Species | Source database | Version | #predicted targets |
|---|---|---|---|
| Human | mirDIP | 4.1 | 1518675 |
| Mouse | miRDB | 6.0 | 986083 |
| Rat | miRDB | 6.0 | 187298 |