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Hierarchical clustering with complete linkage
All miRNAs:
Hierarchical clustering with complete linkage
Expressed miRNAs:
Hierarchical clustering with complete linkage
Top 500 miRNAs determined by coefficient of variation:
Hierarchical clustering with complete linkage
Top 250 miRNAs determined by coefficient of variation:
Hierarchical clustering with complete linkage
Top 100 miRNAs determined by coefficient of variation:
Hierarchical clustering with complete linkage
Top 50 miRNAs determined by coefficient of variation:
Hierarchical clustering with complete linkage
Top 25 miRNAs determined by coefficient of variation:
Hierarchical clustering with complete linkage
Top 10 miRNAs determined by coefficient of variation:
Spearman correlation values:
Spearman correlation with significance marking:
Pearson correlation values:
Pearson correlation values with significance marking:
Principal Variance Component Analysis:
Principle Component Analysis:
cell_line:
UMAP with a neighborhood of 5:
cell_line: mdist0.1_correlation_initrandom_seed42_normraw
cell_line: mdist0.1_correlation_initrandom_seed42_normstd
cell_line: mdist0.1_euclidean_initrandom_seed42_normraw
cell_line: mdist0.25_correlation_initrandom_seed42_normraw
cell_line: mdist0.25_correlation_initrandom_seed42_normstd
cell_line: mdist0.25_euclidean_initrandom_seed42_normraw
UMAP with a neighborhood of 10:
cell_line: mdist0.1_correlation_initrandom_seed42_normraw
cell_line: mdist0.1_correlation_initrandom_seed42_normstd
cell_line: mdist0.1_euclidean_initrandom_seed42_normraw
cell_line: mdist0.25_correlation_initrandom_seed42_normraw
cell_line: mdist0.25_correlation_initrandom_seed42_normstd
cell_line: mdist0.25_euclidean_initrandom_seed42_normraw
UMAP with a neighborhood of 25:
cell_line: mdist0.1_correlation_initrandom_seed42_normraw
cell_line: mdist0.1_correlation_initrandom_seed42_normstd
cell_line: mdist0.1_euclidean_initrandom_seed42_normraw
cell_line: mdist0.25_correlation_initrandom_seed42_normraw
cell_line: mdist0.25_correlation_initrandom_seed42_normstd
cell_line: mdist0.25_euclidean_initrandom_seed42_normraw
Differential expression analysis:
Step 2: Select case options
Step 3: Select control options
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