miRMaster Configuration

This field is required.
Ensure this value has at most 100 characters

Only DNA is allowed.

{$ adapter_description $}

0 {$ wizard_data['barcode_len'] $} 25

0 {$ wizard_data['adapter_barcode_len'] $} 10

0 {$ wizard_data['umi_len'] $} 25

1 {$ wizard_data['min_read_len'] $} 25

0 {$ wizard_data['max_adapter_error'] $} 3

1 {$ wizard_data['min_overlap'] $} 31

0 {$ wizard_data['trim_leading_n'] $} 5

0 {$ wizard_data['trim_trailing_n'] $} 5

{$ getToggleValue('no_n', true) ? "YES" : "NO" $}

1 {$ wizard_data['sliding_window_size'] $} 10

1 {$ wizard_data['sliding_window_qual_thres'] $} 40

1 {$ wizard_data['num_prepro_threads'] $}

1 {$ wizard_data['max_num_mappings'] $} 100

15 {$ wizard_data['mapping_seed_len'] $} 25

0 {$ wizard_data['max_mismatches'] $} 2

0 {$ wizard_data['ncrna_quant_max_mis'] $} 3

0 {$ wizard_data['quant_max_mis'] $} 3

0 {$ wizard_data['quant_max_dist_5p'] $} 5

0 {$ wizard_data['quant_max_dist_3p'] $} 7

0 {$ wizard_data['iso_quant_max_mis'] $} 3

0 {$ wizard_data['iso_quant_max_dist_5p'] $} 5

0 {$ wizard_data['iso_quant_max_dist_3p'] $} 7

0 {$ wizard_data['mis_quant_max_mis'] $} 3

0 {$ wizard_data['mis_quant_max_dist_5p'] $} 5

0 {$ wizard_data['mis_quant_max_dist_3p'] $} 7

1 {$ wizard_data['min_stack_height'] $} 100

50 {$ wizard_data['downstream_window_size'] $} 90

10 {$ wizard_data['short_extension_size'] $} 30

50 {$ wizard_data['long_extension_size'] $} 90

17 {$ wizard_data['min_mat_length'] $} 25

17 {$ wizard_data['max_mat_length'] $} 25

0.1 {$ wizard_data['min_bp'] $} 1.0

0 {$ wizard_data['max_diff_len_mat_star'] $} 12

0.0 {$ wizard_data['max_inconsistent_reads'] $} 1.0

0.0 {$ wizard_data['max_inconsistent_reads_score'] $} 1.0

{$ getToggleValue('default_penalty_parameters', true) ? "YES" : "NO" $}

2 {$ wizard_data['score_penalty'] $} 30

0 {$ wizard_data['nsamples_penalty_limit'] $} 30

0 {$ wizard_data['merge_max_dist'] $} 15

{$ groups[0] $}

Drop files here or click to upload

{$ groups[1] $}

Drop files here or click to upload

Please do not close or refresh the page until all samples have been processed

Oops, sorry! An error was encountered during the processing of your files.

More information can be found in the Status column.

Oops, sorry! You tried to upload {$ num_upload_samples $} samples. Please contact us(current) if you wish to process more than {$ max_files $} samples.

Follow the progress of the analysis

Name	Size	Group	Progress	Status

Name	Size	Progress	Status

Parameter Configuration