Experiment ID
{$ getExperimentID() $}
Experiment
{$ data.experiment_name $}
Sample
{$ data.sample_name $}
{$ (overview_data.valid_seqs + overview_data.removed_seqs).toLocaleString('en-US') $} Original sequences
{$ overview_data.valid_seqs.toLocaleString('en-US') $} Valid sequences
{$ overview_data.trimmed_seqs.toLocaleString('en-US') $} Trimmed sequences
{$ overview_data.removed_seqs.toLocaleString('en-US') $} Removed sequences
{$ overview_data.mean_gc $}% Mean GC-content
Phred+{$ overview_data.encoding $} Encoding

Mapping against the species' genome

All reads

Collapsed reads

Mapping against miRBase

All reads

Collapsed reads

Mapping against other ncRNA databases

Mapping against NCBI bacterium genomes

Mapping against NCBI virus genomes

{$ active_prec $}
Sequence {$ showPreSeg1() $}{$ showSeg1() $}{$ showPreSeg2() $}{$ showSeg2() $}{$ showPostSeg2() $}
MFE {$ quant_data.precs[active_prec].mfe $} kcal/mol
As SVG As PNG As PDF
Sequence {$ showPreSeg1() $}{$ showSeg1() $}{$ showPreSeg2() $}{$ showSeg2() $}{$ showPostSeg2() $}
MFE {$ pred_data.precs[active_prec].pre.mfe $} kcal/mol
As SVG As PNG As PDF
Sequence {$ showPreSeg1() $}{$ showSeg1() $}{$ showPreSeg2() $}{$ showSeg2() $}{$ showPostSeg2() $}
MFE {$ pred_data.precs[active_prec].st.mfe $} kcal/mol
As SVG As PNG As PDF