|Total processed reads||344,959,688,225|
|Total valid reads||275,569,397,993|
|Total reads in unique samples||217,384,391,197|
(bacteria & viruses)
miRMaster 2 is a comprehensive analysis framework for sncRNA-seq data. Samples are directly preprocessed in the browser before being uploaded to our server.
Our tool quantifies miRNAs and other ncRNAs, as well as isomiRs and variants in miRNAs and predicts miRNA candidates.
Further it performs mapping against the NCBI RefSeq collection of bacterial and viral genomes, thereby allowing the detection of contaminations, infections or exogenous miRNAs.
We also provide correlation analyses, clustering and embedding analyses, as well as batch effect quantification and differential expression evaluation.
If you used miRMaster in your work please cite:
T. Fehlmann, C. Backes, M. Kahraman, J. Haas, N. Ludwig, A. E. Posch, M. L. Würstle, M. Hübenthal, A. Franke, B. Meder, E. Meese, A. Keller; Web-based NGS data analysis using miRMaster: a large-scale meta-analysis of human miRNAs. Nucleic Acids Res 2017 gkx595. doi: 10.1093/nar/gkx595
|Linux||Manjaro (64 bit) 20.0.1||87.0.4280.88||83.0||N/A||N/A|
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