html.light {
    /* light mode */
    --main-bg-color-light: #FFFFFF;
    --font-color: #3F4349; 
    --font-color-hover: #000;
    --font-color-inactive: #9B9D9F;
    --internal-link-font-color: #aaa;
    --internal-link-font-color-hover: #fff;
    --link-and-highlight-font-color: #4B842B; 
    --link-and-highlight-font-color-hover: #65B43A;
    --disabled: #999999;
    --small-bg-box: #EEEEEE;
    --border-color-small-box: #DDDDDD;
    --error-bg-box: #FFABAB;
    --border-error-bg-box: #C90000;
    --process-bar-start-color: #E6E6E6;
}
html.dark {
    /* dark mode */
    --main-bg-color-light: #212529;
    --font-color: #dee2e6; 
    --font-color-hover: #fff;
    --font-color-inactive: #9B9D9F;
    --internal-link-font-color: #aaa;
    --internal-link-font-color-hover: #fff;
    --link-and-highlight-font-color: #65B43A; 
    --link-and-highlight-font-color-hover: #7DDF48;
    --disabled: #999999;
    --small-bg-box: #454d55;
    --border-color-small-box: ##999999; /*#454d55*/
    --error-bg-box: #C90000;
    --border-error-bg-box: #FFABAB;
    --process-bar-start-color: #E6E6E6;
}

body {
    background-color: var(--main-bg-color-light);
}
#main-text {
    width: 100%;
}
/* Nav bar */
.navbar-brand {
    padding-left: 2rem;
    color: white;
}
.my-sidebar {
    -ms-flex: 0 0 300px;
    flex: 0 0 300px; 
    color: white;
    border-right: 3px solid var(--internal-link-font-color);
} 
/* #sidebar {
    width: 280px;
    height: 100vh;
    position: fixed;
    z-index: 99;
}
#sidebar-main {
    margin-right: 0 !important;
}
.sidebar-main-text {
    text-align: center;
    margin-bottom: 0.5rem;
    font-size: 100rem;
}
.sidebar-sub-text {
    text-align: center;
    margin-bottom: 0.1rem;
}
.sidebar-btn {
    width:100%;
}*/

.nav-form-switch {
    padding-left: 0.5em !important;
    padding-right: 0.5em !important;
    padding-bottom: 0em !important;
    margin-bottom: 0em !important;
    display: flex;
    align-items: center;
}
.form-check-input:checked { /*dark*/
    background-color: var(--link-and-highlight-font-color);
    border-color: var(--internal-link-font-color);
    fill: var(--internal-link-font-color) !important;
}
.form-check-input { /*light*/
    background-color: var(--link-and-highlight-font-color);
    border-color: var(--internal-link-font-color);
    fill: var(--internal-link-font-color) !important;
}
.checkbox-align {
    vertical-align: top; /* Adjust the vertical alignment as needed */
}
.vertical-center {
    margin: 0;
    position: absolute;
    top: 50%;
    -ms-transform: translateY(-50%);
    transform: translateY(-50%);
  }

/* Basic Setup */
.box-card {
    margin: 1rem auto;
    margin-left: 1rem !important;
    padding: 0.5rem;
    /*width: 80vw;*/
    border-radius: 10px;
    background-color: var(--small-bg-box);
    border-color: var(--border-color-small-box);
    /*background-color: var(--main-bg-color-light);
    border-color: var(--main-bg-color-light);*/
    border-style: solid;
    border-width: 3pt;
    color: var(--font-color);
    font-size: 1.2rem;
    text-align: left;
}
.card-header {
    padding: 0.75rem 1.25rem;
    margin-bottom: 0;
    background-color: var(--small-bg-box);
    /*background-color: var(--main-bg-color-light);*/
    border-bottom: 1px solid rgba(0,0,0,.125);
}
.card-body {
    -ms-flex: 1 1 auto;
    flex: 1 1 auto;
    min-height: 1px;
    padding: 1.25rem;
}
.error-box {
    background-color: var(--error-bg-box);
    border-color: var(--border-error-bg-box);
    border-style: solid;
    border-width: 3pt;
    color: var(--font-color);
    font-size: 1.2rem;
    text-align: left;
    border-radius: 10px;
}
.row {
    display: -ms-flexbox;
    display: flex;
    -ms-flex-wrap: wrap;
    flex-wrap: wrap;
    margin-right: -15px;
    margin-left: -15px;
}

.input_fields {
    width: 100%;
}

/* Results Page */
.icn-spinner {
    animation: spin-animation 1.0s infinite;
    animation-timing-function: linear;
    display: inline-block;
    margin-right:1em;
}

@keyframes spin-animation {
    0% {
        transform: rotate(0deg);
    }
    100% {
        transform: rotate(359deg);
    }
}
#results-container {
    padding-left:4rem;
    padding-right:4rem;
}
.multiqc-iframe {
    width: 100%;/*calc(100% - 4rem);*/
    /*border: 5px solid #212529;*/
    display: block;
}

#div-floater {
    top: 5em !important;
}
.result_div img {
    width: 80%;
    margin-left: auto;
    margin-right: auto;
    display: block;
}

/* Hyperlinks */
.internal-link {
    color: var(--internal-link-font-color) !important;
}
.internal-link:hover {
    color: var(--internal-link-font-color-hover);
}
.internal-link:active {
    color: var(--internal-link-font-color-hover);
}
a:link {
    color: var(--link-and-highlight-font-color);
}
a:hover {
    color: var(--link-and-highlight-font-color-hover) !important;
}
a:active {
    color: var(--link-and-highlight-font-color-hover);
}
a.active {
    color: var(--link-and-highlight-font-color);
}
a:focus {
    color: var(--link-and-highlight-font-color);
}
a:visited {
    color: var(--font-color-inactive);
}
.link-color {
    color: var(--link-and-highlight-font-color) !important;
}

/* Buttons */
.display_result_button {
    color: var(--internal-link-font-color);
    border: none;
    background: none;
    outline: none; 
}
.display_result_button:hover {
    color: var(--link-and-highlight-font-color-hover);
    border: none;
    background: var(---font-color-inactive);
    outline: none; 
}
.display_result_button:active {
    color: var(--link-and-highlight-font-color-hover);
    border: none;
    background: var(--font-color-inactive);
    outline: none; 
}
.display_result_button:focus { 
    color: var(--link-and-highlight-font-color);
    border: none;
    background: none;
    outline: none; 
}
.display_result_button.active {
    color: var(--font-color) !important;
    border: none;
    background: var(--font-color-inactive);
    outline: none; 
}
.text-colour-button {
    color: var(--font-color); /* text color */
    outline: none; /* remove focus outline */
}
.text-colour-button:hover {
    color: var(--font-color-hover);
}
.text-colour-button:active {
    outline: none; /* remove focus outline when clicking */
    box-shadow: none; /* remove button outline shadow when clicking */
}
.text-colour-button:focus {
    outline: none; /* remove focus outline when clicking */
    box-shadow: none; /* remove button outline shadow when clicking */
}

/* Datatables */
.table-container {
    width: calc(100% - 10rem);
    margin-left: 5rem;
    margin-right: 5rem;
    overflow: scroll;
    overflow-y: visible;
    /*height: calc(100vh - 10rem)*/;
}

/* Upload Page */
#drop-area {
    border: 2px dashed var(--font-color);
    text-align: center;
    border-radius: 20px;
    width: 70%;
    height: 8em;
    margin: 50px auto;
    padding: 20px;
    display: flex;
    align-items: center;
    justify-content: center;
}
/*#drop-area.highlight {
    border-color: var(--bg-color);
}*/ 
.file-select-button {
    display: inline-block;
    padding: 10px;
    /*background: var(--primary);*/
    cursor: pointer;
    border-radius: 5px;
    border: 1px solid var(--font-color);
}
.file-select-button:hover {
    color: var(--font-color-hover);
}
#fileElem {
    display: none;
}
/*#upload-table {
    display:none;
}*/
.table-striped>tbody>tr:nth-of-type(odd)>* {
    color: var(--font-color);
    font-size: smaller;
}
th, td {
    color: var(--font-color);
    font-size: smaller;
}
.info-box {
    border-color: var(--font-color);
    border-style: solid;
    border-width: 2pt;
    border-radius: 10px;
    text-align: center;
    margin: 50px auto;
    padding: 20px;
    align-content: center;
    width: fit-content;
    block-size: fit-content;
}
/* Changes the colour of the font at the top of the page to indicate which step of the wizard we are in.*/
.wizard-step-div {
        color: var(--font-color); /* Change this to your desired color */
}

/* Progress bar */
/*progress::-webkit-progress-bar { 
    background: var(--link-and-highlight-font-color); 
}*/
progress::-webkit-progress-value { 
    background-color: var(--link-and-highlight-font-color-hover); 
    accent-color: var(--link-and-highlight-font-color-hover);
}
progress::-moz-progress-bar { 
    background: var(--link-and-highlight-font-color-hover); 
    accent-color: var(--link-and-highlight-font-color-hover);
}
progress { 
    height : 10px; 
    border: 2px solid var(--font-color); 
    border-radius: 10px;
    background-color: var(--process-bar-start-color);
    accent-color: var(--process-bar-start-color);
}

/* DEG pending spinner */
.icn-spinner-myspinner {
    margin-top: 3rem;
    margin-left: calc(50% - 2.5rem);
    font-size: 5rem;
    animation: spin-animation 1.5s infinite;
    animation-timing-function: linear;
    display: inline-block;
}

.icn-spinner {
    animation: spin-animation 1.5s infinite;
    animation-timing-function: linear;
    display: inline-block;
}