|Total processed reads||985,174,300,414|
|Total valid reads||808,744,362,255|
|Total reads in unique samples||565,306,660,397|
(bacteria & viruses)
miRMaster is a comprehensive analysis framework for NGS miRNA samples. Samples are directly preprocessed in the browser before being uploaded to our server.
Its core feature is the prediction of novel miRNAs. In addition to novel miRNA candidates, miRNA and other ncRNA expression is quantified, isoforms of miRNAs are reported and variants in miRNAs are searched.
Further it performs mapping against the NCBI RefSeq collection of bacterial and viral genomes, thereby allowing the detection of contaminations, infections or exogenous miRNAs.
If you have used miRMaster in your work please cite:
T. Fehlmann, C. Backes, M. Kahraman, J. Haas, N. Ludwig, A. E. Posch, M. L. Würstle, M. Hübenthal, A. Franke, B. Meder, E. Meese, A. Keller; Web-based NGS data analysis using miRMaster: a large-scale meta-analysis of human miRNAs. Nucleic Acids Res 2017 gkx595. doi: 10.1093/nar/gkx595